CDS

Accession Number TCMCG065C25534
gbkey CDS
Protein Id XP_004976546.1
Location join(27741688..27741741,27746611..27746765,27747123..27747210,27747546..27747855,27747961..27748284,27750039..27750080,27750209..27750306,27750453..27750572,27750981..27751070,27751166..27751291)
Gene LOC101778729
GeneID 101778729
Organism Setaria italica

Protein

Length 468aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004976489.3
Definition nucleoporin NSP1 isoform X1 [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category U
Description Ran-binding domain
KEGG_TC 1.l.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14295        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0001838        [VIEW IN EMBL-EBI]
GO:0001841        [VIEW IN EMBL-EBI]
GO:0002009        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006606        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008536        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009792        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016331        [VIEW IN EMBL-EBI]
GO:0017016        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0021915        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031267        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0035148        [VIEW IN EMBL-EBI]
GO:0035239        [VIEW IN EMBL-EBI]
GO:0035295        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043009        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048598        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048729        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051170        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060429        [VIEW IN EMBL-EBI]
GO:0060562        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0072175        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGACGCGGGGAGCCAAGCGCGCCGCCACCTCCGACCCGGGCGCCCCCGATCTACCAAGTAAGAGAGTAATGGACGGACCCTCTTTTGATGTTCACAGGGCGGAGTCTTCCCATCAGCATGTGATGGCAGGACCCGCTACTTTAGATCCTCGACGGGCTGAGGCTGCCAGCAAACATGTCAGGGCACTCAATAACCAGTTTGCGAGCTGGGTTCAATTGCAGCTGCAAAATCATCCAGCTGAACTTTGGGAGGATGGTGTCAAAGATTACATATCCCATGCTTCTGAAATCATGGAAAAATTCAAGGATGTTGTCAACTGGCTTAGACAAAATCAAGCAGGTTCAACAGTTGTTTCATCCCCAAGTCCACACAAGGATGAGAAGGCTAATCTGCCAGCAGTTGTTTCATCCCCAAGTCCACTCAAGGATGAGAAGACTAGTCCGCCAACAGCAGATGATAGCAAGCTCTTGGTGCAGCCAAGTTCAGATAACTCGCAGAAGGCTCCAGTGATGGCATCTAGTTCTTCAGCTTTTCAGAGCTCAAGCTCACCAACACCAAACCTTTTTTCATCTCCTCCTAAGTCGCAAACGCCAGATTTCAGTGGTATGTTTGGTGGTAAGAAAAACACATCCGGTGACAGCAATAAACCAGCTTTCCAGTTTGGTGGAAATAATGTCATATTTGGTGACAAAAAGAACGCATCTGGTGATAGCAGTAAACCACCTTTCCAGTTTGGTGGAAATAATGCCATATTTGATGACAAGAAGAGCACATCCGGTGATAGCAGTAAACCACCTTTCCAGTTTGGTGTAAATAATGGTTTTTCAACCTCAAATGCACCATCTTTATTTTCTACTAAAGCTGCCCAAAGTTTTAGCTCACAGGCTCCACCTCTGTTTTCACTGAATCAACAATCAGTTCTATCAGGAAACAAAAATACTTCTGAAGCTTCAGCTGATGCAGATGAAGATGCCGAACCTGAGAAACCAAGCAGCCCTTCTGTAAAGAAGGCAGAAGAGAAAGGAATAGTTGTTGTTCATGAAGCCAAGTGCAAGGTGTATGTGAAGCATGATGATGCTACCAAGGGTTGGAAAGACATTGGTGTTGGTCAACTCTCTATCAGAAGTAAAGAAGGTGCAGAGAAAGCTTCGAAAGAGTCCACTCCGACCATTGTTATTAGAAACGATGTTGGTAAGATTCTCCTGAATGCTTTGATCTACAAGGGGATTAAAATGAATGTTCAGAAGAATACAGTTGCCTCCATATTTCATACTTCGGATGCGCAGTCAGATGAATCAAGCGGTGGCACAGTTGTAGCTCGGACATACTTGTTCCGGTTGAAAAATGAGGAGGAGGCTACAAAGTTGTCGACAGCAATCAAAGAGAACGCGCCCTCGGACTGA
Protein:  
MTTRGAKRAATSDPGAPDLPSKRVMDGPSFDVHRAESSHQHVMAGPATLDPRRAEAASKHVRALNNQFASWVQLQLQNHPAELWEDGVKDYISHASEIMEKFKDVVNWLRQNQAGSTVVSSPSPHKDEKANLPAVVSSPSPLKDEKTSPPTADDSKLLVQPSSDNSQKAPVMASSSSAFQSSSSPTPNLFSSPPKSQTPDFSGMFGGKKNTSGDSNKPAFQFGGNNVIFGDKKNASGDSSKPPFQFGGNNAIFDDKKSTSGDSSKPPFQFGVNNGFSTSNAPSLFSTKAAQSFSSQAPPLFSLNQQSVLSGNKNTSEASADADEDAEPEKPSSPSVKKAEEKGIVVVHEAKCKVYVKHDDATKGWKDIGVGQLSIRSKEGAEKASKESTPTIVIRNDVGKILLNALIYKGIKMNVQKNTVASIFHTSDAQSDESSGGTVVARTYLFRLKNEEEATKLSTAIKENAPSD